3DTRAX® & 3DTRAX.AI™

3DTRAX® & 3DTRAX.AI™

3D image processing & analysis software

For researchers looking to achieve the highest fidelity results, the 3DTRAX platform is purpose-built to partner seamlessly with DHO hardware. Designed as a user-friendly Fiji/ImageJ plugin with a modular licensing system, 3DTRAX can be configured to meet your specific application needs.

  • Optimally process and analyze images collected using DHO engineered point spread function (ePSF) technology
  • Modules available for 3D super resolution, 4D particle tracking, spatial omics counting, 2.5D inspection, and more
  • Upgrade to 3DTRAX.AI for even better analytical accuracy and processing speed
  • Readily export image and tabular data for additional advanced post-processing and statistical analysis
  • Access via API for OEM integrations

Use 3DTRAX® for

3D particle tracking
3D SMLM
Emitter localization
Image reconstruction
Data analysis
Data visualization
Inspection
Deep focus
Spatial omics

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3DTRAX® in action

3D SMLM

3D SMLM

Reconstruct entire 3D structures with molecular precision

Deep Focus smFISH

Deep Focus smFISH

See entire structures in focus with 5x fewer axial slices

4D live-cell tracking

4D live-cell tracking

Capture time evolution of molecular targets in 3D

Spatial omics counting

Spatial omics counting

Rapidly & accurately count labeled molecules through a 3D volume

3DTRAX® modules

3D super resolution

Turn raw images into super-resolved 3D point clouds

3D PSF localization
Drift correction
Accurate photon counting
Cluster analysis

4D particle tracking

Track motion of particles in dynamic systems over time & space

3D PSF localization
Track segmentation
Accurate photon counting
Drift correction

2.5D particle counting

Accurately count high-spatial-density labeled molecular targets

3D PSF localization
Accurate photon counting
Drift correction
Cluster analysis

Deep Focus deconvolution

Enhance resolution & contrast of extended-depth images

Enhance resolution
Increase contrast
Reconstruct 3D volume from efficient axial sampling
Use GPU for accelerated performance

Data visualization and export available for all modules

3DTRAX.AI™

Upgrade to 3DTRAX.AI to use our top-performing Al models

3DTRAX.AI offers across-the-board improvements in:

PSF localization speed
PSF localization yield
PSF localization accuracy
Low-signal PSF localization
High-spatial-density PSF localization